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Schmidt, Helmut; Hahn, Gerald; Deco, Gustavo; Knösche, Thomas R.
Ephaptic coupling in white matter fibre bundles modulates axonal transmission delays. - In: PLoS Computational Biology, ISSN 1553-7358, Bd. 17 (2021), 2, e1007858, S. 1-24

Axonal connections are widely regarded as faithful transmitters of neuronal signals with fixed delays. The reasoning behind this is that extracellular potentials caused by spikes travelling along axons are too small to have an effect on other axons. Here we devise a computational framework that allows us to study the effect of extracellular potentials generated by spike volleys in axonal fibre bundles on axonal transmission delays. We demonstrate that, although the extracellular potentials generated by single spikes are of the order of microvolts, the collective extracellular potential generated by spike volleys can reach several millivolts. As a consequence, the resulting depolarisation of the axonal membranes increases the velocity of spikes, and therefore reduces axonal delays between brain areas. Driving a neural mass model with such spike volleys, we further demonstrate that only ephaptic coupling can explain the reduction of stimulus latencies with increased stimulus intensities, as observed in many psychological experiments.



https://doi.org/10.1371/journal.pcbi.1007858
Dutz, Silvio; Zborowski, Maciej; Häfeli, Urs; Schütt, Wolfgang
Preface to the Special Issue "Scientific and Clinical Applications of Magnetic Carriers". - In: Journal of magnetism and magnetic materials, ISSN 1873-4766, Bd. 525 (2021), 167667

https://doi.org/10.1016/j.jmmm.2020.167667
Dinh, Christoph; Samuelsson, John G.; Hunold, Alexander; Hämäläinen, Matti S.; Khan, Sheraz
Contextual MEG and EEG source estimates using spatiotemporal LSTM networks. - In: Frontiers in neuroscience, ISSN 1662-453X, Bd. 15 (2021), 552666, S. 1-15

Most magneto- and electroencephalography (M/EEG) based source estimation techniques derive their estimates sample wise, independently across time. However, neuronal assemblies are intricately interconnected, constraining the temporal evolution of neural activity that is detected by MEG and EEG; the observed neural currents must thus be highly context dependent. Here, we use a network of Long Short-Term Memory (LSTM) cells where the input is a sequence of past source estimates and the output is a prediction of the following estimate. This prediction is then used to correct the estimate. In this study, we applied this technique on noise-normalized minimum norm estimates (MNE). Because the correction is found by using past activity (context), we call this implementation Contextual MNE (CMNE), although this technique can be used in conjunction with any source estimation method. We test CMNE on simulated epileptiform activity and recorded auditory steady state response (ASSR) data, showing that the CMNE estimates exhibit a higher degree of spatial fidelity than the unfiltered estimates in the tested cases.



https://doi.org/10.3389/fnins.2021.552666
Mulyadi, Indra Hardian; Fiedler, Patrique; Eichardt, Roland; Haueisen, Jens; Supriyanto, Eko
Pareto optimization for electrodes placement: compromises between electrophysiological and practical aspects. - In: Medical & biological engineering & computing, ISSN 1741-0444, Bd. 59 (2021), 2, S. 431-447

Wearable electronics and sensors are increasingly popular for personal health monitoring, including smart shirts containing electrocardiography (ECG) electrodes. Optimal electrode performance requires careful selection of the electrode position. On top of the electrophysiological aspects, practical aspects must be considered due to the dynamic recording environment. We propose a new method to obtain optimal electrode placement by considering multiple dimensions. The electrophysiological aspects were represented by P-, R-, and T-peak of ECG waveform, while the shirt-skin gap, shirt movement, and regional sweat rate represented the practical aspects. This study employed a secondary data set and simulations for the electrophysiological and practical aspects, respectively. Typically, there is no ideal solution that maximizes satisfaction degrees of multiple electrophysiological and practical aspects simultaneously; a compromise is the most appropriate approach. Instead of combining both aspects - which are independent of each other - into a single-objective optimization, we used multi-objective optimization to obtain a Pareto set, which contains predominant solutions. These solutions may facilitate the decision-makers to decide the preferred electrode locations based on application-specific criteria. Our proposed approach may aid manufacturers in making decisions regarding the placement of electrodes within smart shirts.



https://doi.org/10.1007/s11517-021-02319-9
Mosayebi Samani, Mohsen; Jamil, Asif; Salvador, Ricardo; Ruffini, Giulio; Haueisen, Jens; Nitsche, Michael
The impact of individual electrical fields and anatomical factors on the neurophysiological outcomes of tDCS: a TMS-MEP and MRI study. - In: Brain stimulation, ISSN 1876-4754, Bd. 14 (2021), 2, S. 316-326

Background - Transcranial direct current stimulation (tDCS), a neuromodulatory non-invasive brain stimulation technique, has shown promising results in basic and clinical studies. The known interindividual variability of the effects, however, limits the efficacy of the technique. Recently we reported neurophysiological effects of tDCS applied over the primary motor cortex at the group level, based on data from twenty-nine participants who received 15min of either sham, 0.5, 1.0, 1.5 or 2.0 mA anodal, or cathodal tDCS. The neurophysiological effects were evaluated via changes in: 1) transcranial magnetic stimulation (TMS)-induced motor evoked potentials (MEP), and 2) cerebral blood flow (CBF) measured by functional magnetic resonance imaging (MRI) via arterial spin labeling (ASL). At the group level, dose-dependent effects of the intervention were obtained, which however displayed interindividual variability. - Method - In the present study, we investigated the cause of the observed inter-individual variability. To this end, for each participant, a MRI-based realistic head model was designed to 1) calculate anatomical factors and 2) simulate the tDCS- and TMS-induced electrical fields (EFs). We first investigated at the regional level which individual anatomical factors explained the simulated EFs (magnitude and normal component). Then, we explored which specific anatomical and/or EF factors predicted the neurophysiological outcomes of tDCS. - Results - The results highlight a significant negative correlation between regional electrode-to-cortex distance (rECD) as well as regional CSF (rCSF) thickness, and the individual EF characteristics. In addition, while both rCSF thickness and rECD anticorrelated with tDCS-induced physiological changes, EFs positively correlated with the effects. - Conclusion - These results provide novel insights into the dependency of the neuromodulatory effects of tDCS on individual physical factors.



https://doi.org/10.1016/j.brs.2021.01.016
Jaufenthaler, Aaron; Kornack, Thomas; Lebedev, Victor; Limes, Mark E.; Körber, Rainer; Liebl, Maik; Baumgarten, Daniel
Pulsed optically pumped magnetometers: addressing dead time and bandwidth for the unshielded magnetorelaxometry of magnetic nanoparticles. - In: Sensors, ISSN 1424-8220, Bd. 21 (2021), 4, 1212, insges. 19 S.

https://doi.org/10.3390/s21041212
Blum, Maren-Christina; Solf, Benjamin; Hunold, Alexander; Klee, Sascha
Effects of ocular direct current stimulation on full field electroretinogram. - In: Frontiers in neuroscience, ISSN 1662-453X, Bd. 15 (2021), 606557, S. 1-9

https://doi.org/10.3389/fnins.2021.606557
Gresing, Lennart J.; Radon, Patricia; Friedrich, Ralf P.; Zahn, Diana; Raasch, Martin; Mosig, Alexander S.; Dutz, Silvio; Alexiou, Christoph; Wiekhorst, Frank; Hochhaus, Andreas; Clement, Joachim H.
Negatively charged magnetic nanoparticles pass the blood-placenta barrier under continuous flow conditions in a time-dependent manner. - In: Journal of magnetism and magnetic materials, ISSN 1873-4766, Volume 521 (2021), part 2, 167535

The transfer of substances via the blood-placenta barrier is tightly regulated and critical for the fetus and the expecting mother. In case of necessary medical interventions during pregnancy a comprehensive knowledge about the interaction of the drugs with this barrier is indispensable. Therefore well-engineered test systems are needed and valuable transport systems are helpful. We developed an in vitro microfluidic blood-placenta barrier system consisting of the human trophoblast cell line BeWo and human primary placental pericytes. The integrity and stability of the model was verified by a permeability assay and immunocytochemistry. As potential drug carriers magnetic nanoparticles with various coatings were applied and their ability to pass the barrier was quantified by magnetic particle spectroscopy. We could demonstrate that up to 4% of negatively charged nanoparticles pass the barrier in a time-dependent manner.



https://doi.org/10.1016/j.jmmm.2020.167535
Seeland, Marco; Mäder, Patrick
Multi-view classification with convolutional neural networks. - In: PLOS ONE, ISSN 1932-6203, Bd. 16 (2021), 1, e0245230, insges. 17 S.

https://doi.org/10.1371/journal.pone.0245230
Dunker, Susanne; Motivans, Elena; Rakosy, Demetra; Boho, David; Mäder, Patrick; Hornick, Thomas; Knight, Tiffany M.
Pollen analysis using multispectral imaging flow cytometry and deep learning. - In: The new phytologist, ISSN 1469-8137, Bd. 229 (2021), 1, S. 593-606

Pollen identification and quantification are crucial but challenging tasks in addressing a variety of evolutionary and ecological questions (pollination, paleobotany), but also for other fields of research (e.g. allergology, honey analysis or forensics). Researchers are exploring alternative methods to automate these tasks but, for several reasons, manual microscopy is still the gold standard. In this study, we present a new method for pollen analysis using multispectral imaging flow cytometry in combination with deep learning. We demonstrate that our method allows fast measurement while delivering high accuracy pollen identification. A dataset of 426 876 images depicting pollen from 35 plant species was used to train a convolutional neural network classifier. We found the best-performing classifier to yield a species-averaged accuracy of 96%. Even species that are difficult to differentiate using microscopy could be clearly separated. Our approach also allows a detailed determination of morphological pollen traits, such as size, symmetry or structure. Our phylogenetic analyses suggest phylogenetic conservatism in some of these traits. Given a comprehensive pollen reference database, we provide a powerful tool to be used in any pollen study with a need for rapid and accurate species identification, pollen grain quantification and trait extraction of recent pollen.



https://doi.org/10.1111/nph.16882