Erscheinungsjahr 2022

This metagenomics investigation of three closely adjacent sampling sites from an archaeological excavation of a pre-industrial coal mining exploration shaft provides detailed information on the composition of the local soil bacterial communities. The observed significant differences between the samples, reflected in the 16S r-RNA analyses, were consistent with the archaeologically observed situation distinguishing the coal seam, the rapidly deposited bright sediment inside an exploration shaft, and the topsoil sediment. In general, the soils were characterized by a dominance of Proteobacteria, Actinobacteria, Acidobacteria, and Archaea, whereas the coal seam was characterized by the highest proportion of Proteobacteria; the topsoil was characterized by very high proportions of Archaea - in particular, Nitrosotaleaceae - and Acidobacteria, mainly of Subgroup 2. Interestingly, the samples of the fast-deposited bright sediment showed a rank function of OTU abundances with disproportional values in the lower abundance range. This could be interpreted as a reflection of the rapid redeposition of soil material during the refilling of the exploration shaft in the composition of the soil bacterial community. This interpretation is supported by the observation of a comparatively high proportion of reads relating to bacteria known to be alkaliphilic in this soil material. In summary, these investigations confirm that metagenomic analyses of soil material from archaeological excavations can provide valuable information about the local soil bacterial communities and the historical human impacts on them.

We simulate the nonlinear chaotic dynamics of Lorenz-type models for a classical two-dimensional thermal convection flow with three and eight degrees of freedom by a hybrid quantum-classical reservoir computing model. The high-dimensional quantum reservoir dynamics are established by universal quantum gates that rotate and entangle the individual qubits of the tensor product quantum state. A comparison of the quantum reservoir computing model with its classical counterpart shows that the same prediction and reconstruction capabilities of classical reservoirs with thousands of perceptrons can be obtained by a few strongly entangled qubits. We demonstrate that the mean squared error between model output and ground truth in the test phase of the quantum reservoir computing algorithm increases when the reservoir is decomposed into separable subsets of qubits. Furthermore, the quantum reservoir computing model is implemented on a real noisy IBM quantum computer for up to seven qubits. Our work thus opens the door to model the dynamics of classical complex systems in a high-dimensional phase space effectively with an algorithm that requires a small number of qubits.

Fluorescence lifetime imaging ophthalmoscopy (FLIO), a technique for investigating metabolic changes in the eye ground, can reveal the first signs of diseases related to metabolism. The fluorescence of the natural lens overlies the fundus fluorescence. Although the influence of natural lens fluorescence can be somewhat decreased with mathematical models, excluding this influence during the measurement by using hardware enables more exact estimation of the fundus fluorescence. Here, we analyze four 1-photon excitation hardware solutions to suppress the influence of natural lens fluorescence: aperture stop separation, confocal scanning laser ophthalmoscopy, combined confocal scanning laser ophthalmoscopy and aperture stop separation, and dual point confocal scanning laser ophthalmoscopy. The effect of each principle is demonstrated in examples. The best suppression is provided by the dual point principle, realized with a confocal scanning laser ophthalmoscope. In this case, in addition to the fluorescence of the whole eye, the fluorescence of the anterior part of the eye is detected from a non-excited spot of the fundus. The intensity and time-resolved fluorescence spectral data of the fundus are derived through the subtraction of the simultaneously measured fluorescence of the excited and non-excited spots. Advantages of future 2-photon fluorescence excitation are also discussed. This study provides the first quantitative evaluation of hardware principles to suppress the fluorescence of the natural lens during measurements of fundus autofluorescence.

The paper presents AVQBits, a versatile, bitstream-based video quality model. It can be applied in several contexts such as video service monitoring, evaluation of video encoding quality, of gaming video QoE, and even of omnidirectional video quality. In the paper, it is shown that AVQBits predictions closely match video quality ratings obained in various subjective tests with human viewers, for videos up to 4K-UHD resolution (Ultra-High Definition, 3840 x 2180 pixels) and framerates up 120 fps. With the different variants of AVQBits presented in the paper, video quality can be monitored either at the client side, in the network or directly after encoding. The no-reference AVQBits model was developed for different video services and types of input data, reflecting the increasing popularity of Video-on-Demand services and widespread use of HTTP-based adaptive streaming. At its core, AVQBits encompasses the standardized ITU-T P.1204.3 model, with further model instances that can either have restricted or extended input information, depending on the application context. Four different instances of AVQBits are presented, that is, a Mode 3 model with full access to the bitstream, a Mode 0 variant using only metadata such as codec type, framerate, resoution and bitrate as input, a Mode 1 model using Mode 0 information and frame-type and -size information, and a Hybrid Mode 0 model that is based on Mode 0 metadata and the decoded video pixel information. The models are trained on the authors’ own AVT-PNATS-UHD-1 dataset described in the paper. All models show a highly competitive performance by using AVT-VQDB-UHD-1 as validation dataset, e.g., with the Mode 0 variant yielding a value of 0.890 Pearson Correlation, the Mode 1 model of 0.901, the hybrid no-reference mode 0 model of 0.928 and the model with full bitstream access of 0.942. In addition, all four AVQBits variants are evaluated when applying them out-of-the-box to different media formats such as 360˚ video, high framerate (HFR) content, or gaming videos. The analysis shows that the ITU-T P.1204.3 and Hybrid Mode 0 instances of AVQBits for the considered use-cases either perform on par with or better than even state-of-the-art full reference, pixel-based models. Furthermore, it is shown that the proposed Mode 0 and Mode 1 variants outperform commonly used no-reference models for the different application scopes. Also, a long-term integration model based on the standardized ITU-T P.1203.3 is presented to estimate ratings of overall audiovisual streaming Quality of Experience (QoE) for sessions of 30 s up to 5 min duration. In the paper, the AVQBits instances with their per-1-sec score output are evaluated as the video quality component of the proposed long-term integration model. All AVQBits variants as well as the long-term integration module are made publicly available for the community for further research.

Biomechatronics is an engineering subject in which biomimetics as a method is one of its two supporting pillars: biology for engineering, or Bio4Eng. This is contrasted with biocompatible design, or Eng4Bio, examples of which are human-serving systems, such as exoskeletons, and biomedical engineering. The paper aims to illustrate that the research fields of biomimetics, biomechatronics, and biomedical engineering are not in competition but mutually supportive. The current attempts to place biomechatronics under the umbrella of biomimetics or biomedical engineering are therefore not expedient; they deprive the subject of its strength of combining Bio4Eng and Eng4Bio at any time in a task-related manner. In addition to research and development, however, the training of the specialists supporting the subjects must not be disregarded and is therefore described based on a proven design.